NEET-PG 2015 - Biochemistry Practice Questions

Q: Which fat-soluble vitamin is most classically known for its steroid hormone-like action through nuclear receptors?

Vitamin D. ***Correct Answer: Vitamin D*** - **Vitamin D** (specifically its active form, **calcitriol** or **1,25-dihydroxyvitamin D₃**) is the **most classically recognized** fat-soluble vitamin that functions as a **steroid hormone** - It binds to the **vitamin D receptor (VDR)**, which is a member of the **nuclear receptor superfamily** - This VDR-calcitriol complex acts as a transcription factor, regulating gene expression involved in **calcium and phosphate homeostasis**, bone metabolism, skeletal development, and immune function - The mechanism is analogous to classic steroid hormones like cortisol, estrogen, and testosterone *Incorrect: Vitamin A* - **Vitamin A** (as **retinoic acid**) also interacts with nuclear receptors (**retinoic acid receptors - RARs** and **retinoid X receptors - RXRs**) to regulate gene transcription - However, Vitamin A is **most classically associated** with vision (rhodopsin in retinal photoreceptors), epithelial cell differentiation, embryonic development, and immune function - While it does have nuclear receptor-mediated actions, **Vitamin D is more prominently described** as having steroid hormone-like activity in standard medical education *Incorrect: Vitamin K* - **Vitamin K** functions primarily as a **cofactor for γ-glutamyl carboxylase**, an enzyme that catalyzes post-translational modification of glutamate residues to γ-carboxyglutamate (Gla) - Essential for the synthesis of **clotting factors** (II, VII, IX, X, protein C, protein S) and bone proteins (osteocalcin) - Does **not** act through nuclear receptors or function as a steroid hormone *Incorrect: Vitamin E* - **Vitamin E** (α-tocopherol) is a powerful **lipid-soluble antioxidant** that protects cell membranes from oxidative damage by scavenging free radicals - Functions primarily through its **antioxidant properties**, not through nuclear receptor binding - Does **not** have steroid hormone-like actions

Q: Which of the following elements have antioxidant properties?

All of the options. ***All of the options*** - **Selenium**, **copper**, and **zinc** all possess antioxidant properties, directly or indirectly, by being cofactors for various antioxidant enzymes or by directly scavenging free radicals. - These elements play crucial roles in maintaining **cellular redox balance** and protecting against **oxidative stress**. *Selenium* - It is a vital component of **glutathione peroxidase**, a key enzyme in the body's antioxidant defense system, which converts harmful **hydrogen peroxide** into water. - Selenium also contributes to the function of **thioredoxin reductases**, enzymes involved in regulating **redox signaling**. *Copper* - Copper is an essential cofactor for **superoxide dismutase (SOD1 and SOD3)**, an enzyme that catalyzes the dismutation of **superoxide radicals** into oxygen and hydrogen peroxide. - However, excessive copper can also act as a **pro-oxidant**, highlighting the importance of proper balance. *Zinc* - Zinc is another crucial cofactor for **superoxide dismutase (SOD1)** and is involved in protecting cells from **oxidative damage**. - It also stabilizes cell membranes, making them less susceptible to **oxidative damage**, and plays a role in regulating the expression of genes involved in **antioxidant defense**.

Q: In the context of energy metabolism, which coenzyme is niacin a precursor to?

NAD. ***NAD*** - Niacin (vitamin B3) is a direct precursor to **nicotinamide adenine dinucleotide (NAD/NAD+)**. - NAD is the crucial coenzyme in **energy metabolism**, primarily involved in **catabolic pathways** such as glycolysis, TCA cycle, and electron transport chain. - Functions as an **electron carrier** in redox reactions, accepting electrons during oxidation of fuel molecules. *Thiamine pyrophosphate (TPP)* - **Thiamine (vitamin B1)** is the precursor to TPP, not niacin. - TPP plays a vital role in **carbohydrate metabolism**, particularly in pyruvate dehydrogenase and alpha-ketoglutarate dehydrogenase complexes. *NADP* - While niacin is also a precursor to **NADP/NADPH**, this coenzyme is primarily used in **anabolic (biosynthetic) pathways**, not energy metabolism. - NADP functions in reductive biosynthesis (fatty acid synthesis, cholesterol synthesis) and **oxidative stress protection** via the pentose phosphate pathway. - The question specifically asks about **energy metabolism**, making NAD the correct answer as it participates in catabolic, energy-producing reactions. *Flavin adenine dinucleotide (FAD)* - **Riboflavin (vitamin B2)** is the precursor to FAD, not niacin. - FAD is a coenzyme involved in various metabolic reactions, especially in the **TCA cycle** and **electron transport chain**, acting as an electron acceptor.

Q: Which coenzyme is not required in the formation of glutamate?

Thiamine pyrophosphate. ***Thiamine pyrophosphate*** - **Thiamine pyrophosphate (TPP)** is a coenzyme derived from **vitamin B1** that is essential for reactions involving decarboxylation, such as those catalyzed by pyruvate dehydrogenase and alpha-ketoglutarate dehydrogenase. - The formation of glutamate primarily involves transamination or reductive amination, which do not require TPP. *Pyridoxal phosphate* - **Pyridoxal phosphate (PLP)**, derived from **vitamin B6**, is a crucial coenzyme for **transamination reactions**, which are a major pathway for glutamate synthesis (e.g., from alpha-ketoglutarate). - It also plays a role in decarboxylation and deamination reactions of amino acids. *Niacin* - **Niacin (vitamin B3)** is a precursor for **NAD+** and **NADP+**, which are essential coenzymes in many metabolic pathways. - **NADPH**, derived from NADP+, is required as a reductant in the **reductive amination** of **alpha-ketoglutarate** to form glutamate, catalyzed by glutamate dehydrogenase. *None of the above* - This option is incorrect because **thiamine pyrophosphate** is indeed not required for the formation of glutamate. - The other two coenzymes, **pyridoxal phosphate** and **niacin (as NAD(P)H)**, are involved in glutamate synthesis.

Q: Which of the following is not a metabolic product of the urea cycle?

Alanine. ***Alanine*** - **Alanine** is an amino acid primarily involved in the **glucose-alanine cycle** for glucose production and ammonia transport, not as a direct metabolic product within the urea cycle. - While it plays a role in nitrogen metabolism, it is not synthesized or directly consumed as an intermediate in the reactions that convert ammonia to urea. *Citrulline* - **Citrulline** is a key intermediate formed during the second step of the urea cycle when **ornithine carbamoyltransferase** combines carbamoyl phosphate with ornithine. - It is then transported out of the mitochondrion into the cytosol to continue the cycle. *Ornithine* - **Ornithine** is an amino acid that acts as a **catalytic intermediate** in the urea cycle, being regenerated at the end of the cycle to combine with carbamoyl phosphate. - It does not directly contribute a nitrogen atom to urea but is essential for the cycle's continuation. *Arginine* - **Arginine** is an amino acid that is a direct precursor to urea in the penultimate step of the urea cycle, where **arginase** cleaves it into urea and ornithine. - It provides one of the nitrogen atoms and the carbon atom for the formation of urea.

Q: Which amino acid is not involved in transamination?

Lysine. ***Lysine*** - **Lysine** cannot undergo transamination because it lacks the structural requirements for typical transaminase enzymes. - While lysine has both an **α-amino group** and an **ε-amino group**, its metabolic pathway involves **oxidative deamination** rather than transamination. - Along with **threonine**, lysine is one of only two amino acids that do not participate in transamination reactions. *Alanine* - **Alanine** is a major substrate for transamination, readily converting to pyruvate via **alanine transaminase (ALT)**. - This reaction involves the transfer of its **α-amino group** to an α-keto acid, typically α-ketoglutarate, forming glutamate. *Aspartate* - **Aspartate** is actively involved in transamination, converting to oxaloacetate via **aspartate transaminase (AST)**. - Its **α-amino group** is easily transferred to α-ketoglutarate, forming glutamate. *Histidine* - **Histidine** can undergo transamination, though less commonly cited as a primary substrate compared to aspartate and alanine. - It can transfer its **α-amino group** to an α-keto acid, leading to the formation of imidazolepyruvate.

Q: Boiled cabbage or rancid butter smelling urine is seen in

Isovaleric Acidaemia. ***Isovaleric Acidaemia*** - **Boiled cabbage or rancid butter odor** in urine is a classic feature of isovaleric acidemia, caused by the accumulation of isovaleric acid. - This **inborn error of metabolism** affects **leucine metabolism** due to deficiency of isovaleryl-CoA dehydrogenase. *Tyrosinemia* - Does NOT present with boiled cabbage or rancid butter odor. The characteristic features are **liver dysfunction** and **renal tubular defects**. - Tyrosinemia Type I is caused by deficiency of **fumarylacetoacetate hydrolase**, leading to accumulation of tyrosine metabolites. *Phenylketonuria* - Characterized by a **mousy or musty odor** in urine, resulting from the accumulation of phenylacetic acid. - The defect is in the enzyme **phenylalanine hydroxylase**, not associated with boiled cabbage odor. *Multiple carboxylase deficiency* - Typically presents with a **"cat urine" smell** due to the accumulation of various organic acids. - The deficiency impairs the function of several **biotin-dependent carboxylases**, not specifically linked to the boiled cabbage odor.

Q: Apo B48 is synthesized in -

Intestine. ***Intestine*** - **Apo B48** is a truncated form of apolipoprotein B-100, uniquely synthesized in the **intestine** through RNA editing. - It is a crucial structural component of **chylomicrons**, which are lipoprotein particles responsible for transporting exogenous dietary lipids from the intestine to other tissues. *Liver* - The liver primarily synthesizes **Apo B100**, which is a full-length apolipoprotein B and a major component of VLDL, IDL, and LDL. - It does not produce Apo B48. *Kidney* - The kidneys are involved in filtering waste products and regulating fluid balance, but they do not play a role in the synthesis of apolipoproteins like Apo B48. - Kidney cells are not equipped with the specific machinery for Apo B mRNA editing. *RBCs* - Red blood cells (RBCs) are primarily responsible for oxygen transport and lack a nucleus and most organelles, including those required for protein synthesis. - Therefore, RBCs cannot synthesize proteins such as Apo B48.

Q: What is the end product of purine metabolism in most mammals?

Allantoin. ***Allantoin*** - **Allantoin** is the primary end product of **purine metabolism** in **most mammals** (except humans and higher primates), formed by the oxidation of uric acid by the enzyme **uricase**. - This conversion makes purine waste products more **water-soluble** and easier to excrete via the kidneys. - **Important clinical note:** Humans lack functional uricase, so **uric acid** is the end product in humans; this distinction is why hyperuricemia and gout occur in humans but not in most other mammals. *Glycogen* - **Glycogen** is a complex carbohydrate and serves as a primary **energy storage molecule** in animals, derived from glucose metabolism, not purine catabolism. - Its metabolism is regulated by hormones like **insulin** and **glucagon**, involved in maintaining blood glucose levels. *Pyrimidine* - **Pyrimidine** is a type of nitrogenous base, structurally distinct from purines, and is a component of DNA and RNA, not an end product of purine catabolism. - **Pyrimidine metabolism** involves the synthesis and breakdown of bases like cytosine, thymine, and uracil, which follows a separate biochemical pathway. *Histidine* - **Histidine** is an **essential amino acid**, a building block of proteins, and is involved in various metabolic processes, including histamine synthesis. - It plays no role as an end product of purine degradation; rather, its own metabolism leads to products like **urocanic acid**.

Q: Which of the following statements is true regarding the sigma factor?

It is a subunit of RNA polymerase.. ***It is a subunit of RNA polymerase.*** - The **sigma factor** is a crucial component of **bacterial RNA polymerase**, guiding it to specific promoter regions on the DNA. - It plays a vital role in **initiation of transcription** by recognizing and binding to the **-10 and -35 boxes** of the promoter. *It is a subunit of DNA polymerase.* - **DNA polymerase** is primarily involved in **DNA replication and repair**, not transcription. - Its subunits, such as the **beta clamp** or **alpha subunit**, are distinct from the sigma factor. *It initiates DNA replication.* - **DNA replication** is initiated by **DNA helicases** unwinding the double helix and **primase** synthesizing RNA primers. - The sigma factor's role is in **transcription**, the synthesis of RNA from a DNA template. *It is a subunit of the 50s ribosome.* - The **50S ribosomal subunit** is a component of the **ribosome**, responsible for **peptide bond formation** during translation. - Its subunits are ribosomal proteins and ribosomal RNA molecules, not the sigma factor.

Question 1

Which fat-soluble vitamin is most classically known for its steroid hormone-like action through nuclear receptors?

Accepted Answer

Vitamin D

Answer

Vitamin K

Answer

Vitamin A

Answer

Vitamin E

Question 2

Which of the following elements have antioxidant properties?

Accepted Answer

All of the options

Answer

Copper

Answer

Zinc

Answer

Selenium

Question 3

In the context of energy metabolism, which coenzyme is niacin a precursor to?

Accepted Answer

NAD

Answer

Thiamine pyrophosphate (TPP)

Answer

NADP

Answer

Flavin adenine dinucleotide (FAD)

Question 4

Which coenzyme is not required in the formation of glutamate?

Accepted Answer

Thiamine pyrophosphate

Answer

None of the above

Answer

Pyridoxal phosphate

Answer

Niacin

Question 5

Which of the following is not a metabolic product of the urea cycle?

Accepted Answer

Alanine

Answer

Citrulline

Answer

Arginine

Answer

Ornithine

Question 6

Which amino acid is not involved in transamination?

Accepted Answer

Lysine

Answer

Alanine

Answer

Aspartate

Answer

Histidine

Question 7

Boiled cabbage or rancid butter smelling urine is seen in

Accepted Answer

Isovaleric Acidaemia

Answer

Tyrosinemia

Answer

Phenylketonuria

Answer

Multiple carboxylase deficiency

Question 8

Apo B48 is synthesized in -

Accepted Answer

Intestine

Answer

Liver

Answer

Kidney

Answer

RBCs

Question 9

What is the end product of purine metabolism in most mammals?

Accepted Answer

Allantoin

Answer

Glycogen

Answer

Pyrimidine

Answer

Histidine

Question 10

Which of the following statements is true regarding the sigma factor?

Accepted Answer

It is a subunit of RNA polymerase.

Answer

It is a subunit of DNA polymerase.

Answer

It initiates DNA replication.

Answer

It is a subunit of the 50s ribosome.

NEET-PG 2015 — Biochemistry