NEET-PG 2012 - Biochemistry Practice Questions

Q: Which of the following is a termination codon?

UAA. ***UAA*** - **UAA** is one of the three **stop codons** (UAA, UAG, UGA) that signals the termination of protein synthesis during translation. - When the ribosome encounters a UAA codon, no corresponding tRNA with an anticodon binds, and release factors bind instead, leading to the dissociation of the polypeptide chain. *AUG* - **AUG** is the universal **start codon** in most organisms, encoding for methionine in eukaryotes and N-formylmethionine in prokaryotes. - Its presence signals the initiation of protein synthesis, not its termination. *AUA* - **AUA** is a codon that codes for the amino acid **Isoleucine**. - It is a **sense codon** and does not act as a signal for termination. *AGG* - **AGG** is a codon that codes for the amino acid **Arginine**. - Similar to AUA, it is a **sense codon** and participates in elongating the polypeptide chain, rather than terminating it.

Q: Protein refolding is carried out by?

Chaperone. ***Chaperone*** - **Chaperone proteins** assist in the proper folding of other proteins, particularly during stress conditions like heat shock, by preventing **aggregation** and promoting correct conformation. - They do not become part of the final functional protein but transiently bind during the folding process, thus facilitating **protein refolding** and assembly. *Valine* - **Valine** is an **essential amino acid** and a building block for proteins, but it does not play a direct role in protein refolding. - It contributes to the **hydrophobic core** of proteins due to its non-polar side chain, influencing protein structure but not managing the folding process. *Threonine* - **Threonine** is an **essential amino acid** with a polar side chain, often involved in **glycosylation** and phosphorylation, but not in the complex process of protein refolding. - Its hydroxyl group can participate in **hydrogen bonding**, influencing protein stability and interactions, but not acting as a folding catalyst. *Aspartate* - **Aspartate** is a **non-essential acidic amino acid** that can be involved in various metabolic pathways and is a component of proteins. - Its acidic side chain can form **salt bridges** and hydrogen bonds, contributing to the protein's overall charge and structure, but it does not actively oversee protein refolding.

Q: Where does oxidative deamination primarily occur in the human body?

Mitochondria of liver cells. ***Mitochondria of liver cells*** - **Oxidative deamination**, particularly of glutamate, is a central process in **amino acid catabolism** and occurs predominantly in the **mitochondria of liver cells**. - This process is crucial for removing the **amino group (NH3)** from amino acids, forming ammonia, which is then detoxified into urea. *Cytoplasm of all cells* - While cells have cytoplasmic metabolic pathways, the primary enzyme for oxidative deamination, **glutamate dehydrogenase**, is located in the mitochondria. - The cytoplasm primarily handles glycolysis and various synthetic pathways, but not the bulk of oxidative deamination. *Mitochondria of all cells* - Although mitochondria are the site of oxidative metabolism in most cells, the **liver** is the main organ responsible for processing exogenous amino acids and their subsequent comprehensive deamination. - Other cells perform some amino acid metabolism, but not the large-scale oxidative deamination seen in the liver. *Cytoplasm of liver cells* - The cytoplasm of liver cells is involved in various metabolic processes, including gluconeogenesis and fatty acid synthesis. - However, the key enzymes for oxidative deamination are specifically compartmentalized within the **mitochondria** of these cells, not the cytoplasm.

Q: Which of the following is a plasma protein involved in blood clotting?

Fibrinogen. ***Fibrinogen*** - **Fibrinogen** is a crucial plasma protein that is converted into **fibrin** during the coagulation cascade. - **Fibrin** then forms a meshwork, which is the structural basis of a **blood clot**. *Lactate dehydrogenase (LDH)* - **LDH** is an enzyme found in many tissues throughout the body and is involved in **cellular metabolism**, specifically the conversion of pyruvate to lactate. - Elevated levels of **LDH** can indicate tissue damage or disease but are not directly involved in blood clotting. *Aspartate aminotransferase (SGOT)* - **SGOT** (now commonly referred to as **AST**) is an enzyme primarily found in the **liver, heart, skeletal muscle, kidneys, brain, and red blood cells**. - High levels of **AST** are often indicative of **liver damage** or other organ injury, but it does not play a direct role in blood coagulation. *Alanine aminotransferase (SGPT)* - **SGPT** (now commonly referred to as **ALT**) is an enzyme predominantly found in the **liver**. - Elevated **ALT** levels are a sensitive marker for **liver cell damage** but are not involved in the blood clotting process.

Q: Where does omega oxidation of fatty acids occur?

Endoplasmic Reticulum. ***Endoplasmic Reticulum*** - **Omega oxidation** of fatty acids occurs in the **endoplasmic reticulum (microsomes)** of liver and kidney cells. - This pathway involves **hydroxylation of the terminal omega carbon** by **cytochrome P450 enzymes** located in the smooth ER. - The omega carbon is then oxidized to a **carboxyl group**, forming a **dicarboxylic acid**. - This is a **minor pathway** that becomes important when **beta-oxidation is impaired** or for metabolism of **medium-chain fatty acids**. *Cytosol* - The cytosol is involved in **fatty acid synthesis**, not omega oxidation. - While some later steps of fatty acid metabolism occur in the cytosol, the initial hydroxylation step of omega oxidation requires ER-localized cytochrome P450 enzymes. *Mitochondria* - **Mitochondria** are the primary site for **beta-oxidation** of fatty acids, not omega oxidation. - Beta-oxidation sequentially removes **two-carbon units from the carboxyl end**, which is distinct from omega oxidation. - The dicarboxylic acids produced by omega oxidation may subsequently undergo beta-oxidation in mitochondria. *None of the options* - This option is incorrect because the endoplasmic reticulum is the correct cellular location for omega oxidation. - The ER contains the necessary cytochrome P450 enzymes for the hydroxylation reaction that initiates this pathway.

Q: What cofactor is required for the proper functioning of glucose-6-phosphate dehydrogenase?

NADP. ***NADP*** - **NADP+** (nicotinamide adenine dinucleotide phosphate) acts as the **electron acceptor** in the **glucose-6-phosphate dehydrogenase (G6PD)** reaction, becoming **NADPH**. - **NADPH** is crucial for maintaining the **redox balance** in cells, particularly in red blood cells, by reducing **oxidative stress**. *NAD* - **NAD+** (nicotinamide adenine dinucleotide) is a primary cofactor for many **dehydrogenase reactions** in catabolic pathways like **glycolysis** and the **Krebs cycle**. - It primarily functions as an electron acceptor in pathways that generate **ATP**, distinct from the role of **NADPH** in reductive biosynthesis and antioxidant defense. *FAD* - **FAD** (flavin adenine dinucleotide) is a coenzyme derived from **riboflavin (vitamin B2)** that is involved in various redox reactions, often in the form of **flavoproteins**. - Enzymes like **succinate dehydrogenase** in the electron transport chain utilize **FAD** as an electron acceptor, which is not the case for G6PD. *FMN* - **FMN** (flavin mononucleotide) is another coenzyme derived from **riboflavin**, structurally similar to FAD but lacking the additional adenosine monophosphate. - It participates in electron transfer reactions, particularly within **complex I** of the **electron transport chain**, but is not a cofactor for G6PD.

Q: What is the classification of the Y chromosome?

Submetacentric. ***Submetacentric*** - The **Y chromosome** is classified as submetacentric because its **centromere** is located off-center, resulting in two arms of unequal length. - The short arm (Yp) is smaller than the long arm (Yq), but not as disproportionate as in acrocentric chromosomes. - The **X chromosome** is also submetacentric, making both sex chromosomes belong to this category. *Metacentric* - A **metacentric chromosome** has its **centromere** located in the middle, resulting in two arms of approximately equal length. - Examples include chromosomes 1, 3, 16, 19, and 20, which have nearly equal arm ratios unlike the Y chromosome. *Acrocentric* - An **acrocentric chromosome** has its **centromere** located very close to one end, creating one very short arm and one very long arm. - The five acrocentric human chromosomes are **13, 14, 15, 21, and 22**, which possess satellite DNA and nucleolar organizing regions (NORs) on their short arms. - The **Y chromosome is NOT acrocentric** despite historical confusion; it has a more centrally positioned centromere than true acrocentric chromosomes. *None of the options* - This option is incorrect because the Y chromosome has a specific and well-established classification as **submetacentric** based on its centromere position and arm ratio.

Q: Which of the following substances does not inhibit glycolysis?

Fluoroacetate. ***Fluoroacetate*** - **Fluoroacetate** is not a direct inhibitor of glycolysis. Instead, it is metabolized to **fluorocitrate**, which then acts as an inhibitor of **aconitase** in the **Krebs cycle (TCA cycle)**, thereby affecting cellular respiration at a later stage. - Its primary role in metabolic inhibition is within the **mitochondria**, impacting energy production via the TCA cycle rather than the glycolytic pathway. *Fluoride* - **Fluoride** is a known inhibitor of **enolase**, an enzyme in the penultimate step of glycolysis. - It forms a complex with **magnesium** and **phosphate** to block the active site of enolase, preventing the conversion of 2-phosphoglycerate to phosphoenolpyruvate. *Arsenite* - **Arsenite** inhibits glycolysis by targeting enzymes containing **sulfhydryl (–SH) groups**, particularly **glyceraldehyde-3-phosphate dehydrogenase (GAPDH)**, a critical enzyme in the glycolytic pathway. - It also inhibits the **pyruvate dehydrogenase complex** (linking glycolysis to the TCA cycle) and TCA cycle enzymes like **α-ketoglutarate dehydrogenase**, thereby affecting multiple stages of cellular respiration. *Iodoacetate* - **Iodoacetate** is a potent inhibitor of the enzyme **glyceraldehyde-3-phosphate dehydrogenase (GAPDH)**. - It specifically alkylates the **cysteine residue** at the active site of GAPDH, preventing the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate, thereby blocking glycolysis.

Q: Which tissue cannot convert glucose 6-phosphate to free glucose due to lack of glucose-6-phosphatase?

Muscle. ***Muscle*** - Muscle tissue lacks the enzyme **glucose-6-phosphatase**, which is essential for hydrolyzing glucose 6-phosphate back to **free glucose**. - Therefore, glucose 6-phosphate in muscle is primarily used for **glycolysis** (energy production) or stored as glycogen for local use. *Liver* - The liver contains **glucose-6-phosphatase**, allowing it to convert **glucose 6-phosphate** to **free glucose**. - This capability is crucial for maintaining **blood glucose homeostasis** and releasing glucose into circulation. *Adipose tissue* - Adipose tissue, like muscle, **lacks glucose-6-phosphatase** and cannot convert glucose 6-phosphate back to free glucose. - Glucose 6-phosphate in adipose tissue is primarily channeled into **fatty acid synthesis** and storage. *Kidney* - The kidney, particularly the renal cortex, possesses **glucose-6-phosphatase** and can convert glucose 6-phosphate to **free glucose**. - This contributes to **gluconeogenesis** and release of glucose into the blood, especially during fasting.

Question 1

Which of the following is a termination codon?

Accepted Answer

UAA

Answer

AUG

Answer

AUA

Answer

AGG

Question 2

Protein refolding is carried out by?

Accepted Answer

Chaperone

Answer

Valine

Answer

Threonine

Answer

Aspartate

Question 3

Where does oxidative deamination primarily occur in the human body?

Accepted Answer

Mitochondria of liver cells

Answer

Cytoplasm of all cells

Answer

Mitochondria of all cells

Answer

Cytoplasm of liver cells

Question 4

Which of the following is a plasma protein involved in blood clotting?

Accepted Answer

Fibrinogen

Answer

Lactate dehydrogenase (LDH)

Answer

Aspartate aminotransferase (SGOT)

Answer

Alanine aminotransferase (SGPT)

Question 5

Which of the following statements BEST describes the net ATP production in glycolysis?

Accepted Answer

Glycolysis produces a net gain of 2 ATP per glucose molecule

Answer

Glycolysis produces 2 molecules of pyruvate

Answer

Hexokinase consumes ATP during glycolysis

Answer

Aldolase catalyzes the conversion of fructose-1,6-bisphosphate into two three-carbon molecules

Question 6

Where does omega oxidation of fatty acids occur?

Accepted Answer

Endoplasmic Reticulum

Answer

Cytosol

Answer

Mitochondria

Answer

None of the options

Question 7

What cofactor is required for the proper functioning of glucose-6-phosphate dehydrogenase?

Accepted Answer

NADP

Answer

NAD

Answer

FAD

Answer

FMN

Question 8

What is the classification of the Y chromosome?

Accepted Answer

Submetacentric

Answer

Metacentric

Answer

Acrocentric

Answer

None of the options

Question 9

Which of the following substances does not inhibit glycolysis?

Accepted Answer

Fluoroacetate

Answer

Fluoride

Answer

Arsenite

Answer

Iodoacetate

Question 10

Which tissue cannot convert glucose 6-phosphate to free glucose due to lack of glucose-6-phosphatase?

Accepted Answer

Muscle

Answer

Liver

Answer

Kidney

Answer

Adipose tissue

NEET-PG 2012 — Biochemistry