NEET-PG 2013 - Biochemistry Practice Questions

Q: Which type of bond is primarily responsible for the primary structure of a protein?

Peptide bond. ***Peptide bond*** - The **primary structure** of a protein is defined by the unique linear sequence of **amino acids** linked together by **peptide bonds**. - These are **amide bonds** formed between the carboxyl group of one amino acid and the amino group of another, with the elimination of water. *Hydrogen bond* - **Hydrogen bonds** are crucial for the **secondary structure** (e.g., alpha-helices and beta-sheets) and **tertiary/quaternary structures** of proteins, stabilizing their 3D folds. - They involve interactions between polar atoms, not the direct linkage of amino acids in the primary sequence. *Disulfide bond* - **Disulfide bonds** are **covalent bonds** formed between the sulfur atoms of two **cysteine residues**, contributing to the **tertiary** and sometimes **quaternary structure** stability. - They are not involved in forming the linear sequence of amino acids, which is the primary structure. *Electrostatic bond* - **Electrostatic bonds**, or **ionic bonds**, occur between oppositely charged amino acid side chains and are important for **tertiary** and **quaternary structure** stability. - They do not form the backbone of the protein's primary sequence.

Q: Which amino acid has two chiral centers?

Threonine. ***Threonine*** - Threonine is unique among the standard 20 amino acids because it possesses **two chiral centers**: one at the **alpha-carbon** and another at the **beta-carbon**. - The presence of two chiral centers means that threonine can exist as **four stereoisomers** (2^n, where n is the number of chiral centers). *Tryptophan* - Tryptophan has only **one chiral center**, which is the **alpha-carbon** bonded to the amino group, carboxyl group, hydrogen atom, and the side chain. - Its side chain, an **indole ring**, does not contain an additional chiral center. *Tyrosine* - Tyrosine, like most amino acids, possesses only **one chiral center** at its **alpha-carbon**. - The aromatic ring system (phenol group) in its side chain does not introduce another chiral center. *Phenylalanine* - Phenylalanine also has only **one chiral center** located at its **alpha-carbon**. - Its benzyl side chain, consisting of a methylene group and a benzene ring, is not chiral.

Q: Which of the following is a neutral amino acid?

Glycine. ***Glycine*** - **Glycine** has a hydrogen atom as its side chain, making it the **simplest amino acid** and electrically neutral at physiological pH. - Its **nonpolar side chain** contributes to its neutral charge and allows it to fit into various protein structures. *Aspartate* - **Aspartate** is an **acidic amino acid** with a carboxyl group in its side chain. - This **carboxyl group** can lose a proton, giving aspartate a net negative charge at physiological pH. *Arginine* - **Arginine** is a **basic amino acid** characterized by a guanidinium group in its side chain. - The **guanidinium group** contains multiple nitrogen atoms that can accept protons, making arginine positively charged at physiological pH. *Histidine* - **Histidine** is classified as a **basic amino acid** due to the imidazole ring in its side chain. - The **imidazole ring** has a pKa close to physiological pH, allowing it to be protonated and positively charged, but it is not neutral.

Q: Ketone bodies are not used by?

RBC. ***RBC*** - Red blood cells **lack mitochondria**, which are essential organelles for the **oxidation of ketone bodies** (acetoacetate and β-hydroxybutyrate) for energy production. - Their primary energy source is **anaerobic glycolysis** of glucose. *Muscle* - **Skeletal and cardiac muscles** readily utilize **ketone bodies** as an alternative fuel source, especially during prolonged fasting or starvation. - This helps to conserve glucose for other tissues, particularly the brain. *Brain* - The brain can adapt to use **ketone bodies** for energy when glucose supply is limited, such as during prolonged fasting or in cases of uncontrolled diabetes. - This process is crucial for brain function when glucose levels are low. *Renal cortex* - The **renal cortex** is capable of utilizing **ketone bodies** for energy, particularly during starvation. - The kidney is also involved in the **synthesis of glucose** (gluconeogenesis) and the excretion of ketone bodies.

Q: Amino acid with aliphatic side chain is?

Leucine. ***Leucine*** - Leucine has an **isobutyl group** (-CH2CH(CH3)2) as its side chain, making it a **nonpolar aliphatic amino acid**. - **Aliphatic amino acids** (glycine, alanine, valine, leucine, isoleucine, proline) have side chains consisting of only carbon and hydrogen atoms in straight or branched chains, with **no polar functional groups**. - These amino acids are **hydrophobic** and typically found in the interior of proteins. *Serine* - Serine has a **hydroxyl group** (-OH) in its side chain (-CH2OH), classifying it as a **polar uncharged amino acid**, not an aliphatic amino acid. - The hydroxyl group makes the side chain **hydrophilic** and capable of hydrogen bonding. - The presence of the polar functional group distinguishes it from aliphatic amino acids. *Threonine* - Threonine also contains a **hydroxyl group** (-OH) in its side chain (-CH(OH)CH3), making it a **polar uncharged amino acid**, not an aliphatic amino acid. - Like serine, the hydroxyl group provides **polarity and hydrogen bonding capacity**. - This functional group places it in a different classification from aliphatic amino acids. *Aspartate* - Aspartate has a **carboxyl group** (-COOH) in its side chain (-CH2COOH), making it an **acidic (negatively charged) amino acid**. - At physiological pH, this group is deprotonated (COO⁻), making aspartate **negatively charged**. - This clearly distinguishes it from nonpolar aliphatic amino acids.

Q: Serotonin is derived from -

Tryptophan. ***Tryptophan*** - **Serotonin**, also known as 5-hydroxytryptamine (5-HT), is synthesized from the essential amino acid **tryptophan** through a two-step enzymatic pathway. - Tryptophan is first hydroxylated by tryptophan hydroxylase to 5-hydroxytryptophan (5-HTP), which is then decarboxylated by L-amino acid decarboxylase to form serotonin. *Tyrosine* - **Tyrosine** is a precursor for the synthesis of **catecholamines** (dopamine, norepinephrine, and epinephrine) and thyroid hormones. - It is not involved in the synthesis pathway for serotonin. *Phenylalanine* - **Phenylalanine** is an essential amino acid that is hydroxylated to form **tyrosine**. - Therefore, it is indirectly involved in catecholamine synthesis but not in serotonin synthesis. *Methionine* - **Methionine** is an essential amino acid primarily known for its role in protein synthesis and as a precursor for **S-adenosylmethionine (SAM)**, a methyl group donor in many biological reactions. - It does not serve as a direct precursor for serotonin.

Q: Catecholamines are synthesized from?

Tyrosine. ***Tyrosine*** - **Tyrosine** is the direct precursor amino acid for the synthesis of all **catecholamines**, including **dopamine**, **norepinephrine**, and **epinephrine**. - The synthesis pathway begins with the conversion of tyrosine to **L-DOPA** by tyrosine hydroxylase, followed by subsequent enzymatic steps. *Methionine* - **Methionine** is an essential amino acid primarily involved in **protein synthesis** and as a precursor for S-adenosylmethionine (SAM), a key methyl donor in various metabolic reactions. - It is not a direct precursor for the synthesis of **catecholamines**. *Histidine* - **Histidine** is the precursor for the synthesis of **histamine**, a neurotransmitter and inflammatory mediator. - It is not involved in the biosynthesis pathway of **catecholamines**. *Tryptophan* - **Tryptophan** is the precursor for the synthesis of **serotonin** and **melatonin**, important neurotransmitters and hormones. - It does not play a role in the synthesis of **catecholamines**.

Q: Which of the following amino acids is not involved in the production of creatine?

Alanine. ***Alanine*** - **Alanine** is not directly involved as a precursor for **creatine synthesis**. It can be converted to pyruvate and enter the gluconeogenic pathway. - The primary amino acids involved in **creatine synthesis** are arginine, glycine, and methionine. *Glycine* - **Glycine** is a direct precursor for creatine, reacting with arginine in the first step of its synthesis to form **guanidinoacetate**. - This reaction is catalyzed by **arginine:glycine amidinotransferase (AGAT)**. *Methionine* - **Methionine**, in the form of **S-adenosylmethionine (SAM)**, acts as the methyl donor in the second step of creatine synthesis. - It methylates guanidinoacetate to form **creatine**, a reaction catalyzed by **guanidinoacetate methyltransferase (GAMT)**. *Arginine* - **Arginine** donates its guanidino group to glycine, forming **guanidinoacetate**, the initial intermediate in creatine synthesis. - This is the first committed step in the **creatine biosynthesis pathway**.

Q: Ninhydrin test is used for?

Amino acids. ***Amino acids*** - The **ninhydrin test** is a chemical test used to detect the presence of **amino acids** and primary and secondary amines. - It produces a **purple-blue color** when it reacts with most amino acids, due to the formation of a colored complex called Ruhemann's purple. *Bile salts* - The detection of **bile salts** typically involves tests like Hay's test or Pettenkofer's test, which are distinct from the ninhydrin reaction. - These tests rely on the physical or chemical properties of bile salts, such as changes in surface tension or specific color reactions with sulfuric acid. *Nucleic acid* - **Nucleic acids** (DNA and RNA) are detected using specific tests like the **diphenylamine test** (for DNA) or orcinol test (for RNA). - These tests target the deoxyribose or ribose sugars present in their structures and result in different color changes compared to ninhydrin. *Lipids* - **Lipids** are typically identified using tests that exploit their nonpolar nature, such as the **emulsion test** or solubility tests in organic solvents. - Their detection does not involve ninhydrin, as they lack the primary or secondary amine groups that react with this reagent.

Q: Which of the following is not a phospholipid ?

Ganglioside. ***Ganglioside*** - Gangliosides are a type of **glycosphingolipid** because their structure includes a ceramide (a sphingoid base linked to a fatty acid) and a carbohydrate portion with one or more **sialic acid** residues, but no phosphate group. - They are primarily found in **nerve cell membranes** and are crucial for cell-cell recognition and signaling, differentiating them from phospholipids which contain a phosphate group. *Lecithin* - Lecithin, specifically **phosphatidylcholine**, is a common phospholipid characterized by a **phosphate group** and a **choline head group** attached to a diacylglycerol backbone. - It plays vital roles in cell membrane structure and function and is an important emulsifier. *Plasmalogen* - Plasmalogens are a class of phospholipids characterized by a **vinyl ether linkage** at the *sn*-1 position of the glycerol backbone, instead of the typical ester linkage found in other phospholipids. - They retain the defining **phosphate group** that classifies them as phospholipids. *Cardiolipin* - Cardiolipin is a unique phospholipid composed of **two phosphatidic acid moieties** connected by a glycerol molecule, resulting in four fatty acid chains and two phosphate groups. - It is predominantly found in the **inner mitochondrial membrane**, essential for mitochondrial function.

Question 1

Which type of bond is primarily responsible for the primary structure of a protein?

Accepted Answer

Peptide bond

Answer

Hydrogen bond

Answer

Disulfide bond

Answer

Electrostatic bond

Question 2

Which amino acid has two chiral centers?

Accepted Answer

Threonine

Answer

Tyrosine

Answer

Tryptophan

Answer

Phenylalanine

Question 3

Which of the following is a neutral amino acid?

Accepted Answer

Glycine

Answer

Aspartate

Answer

Arginine

Answer

Histidine

Question 4

Ketone bodies are not used by?

Accepted Answer

RBC

Answer

Brain

Answer

Muscle

Answer

Renal cortex

Question 5

Amino acid with aliphatic side chain is?

Accepted Answer

Leucine

Answer

Serine

Answer

Threonine

Answer

Aspartate

Question 6

Serotonin is derived from -

Accepted Answer

Tryptophan

Answer

Tyrosine

Answer

Phenylalanine

Answer

Methionine

Question 7

Catecholamines are synthesized from?

Accepted Answer

Tyrosine

Answer

Histidine

Answer

Methionine

Answer

Tryptophan

Question 8

Which of the following amino acids is not involved in the production of creatine?

Accepted Answer

Alanine

Answer

Glycine

Answer

Methionine

Answer

Arginine

Question 9

Ninhydrin test is used for?

Accepted Answer

Amino acids

Answer

Bile salts

Answer

Nucleic acid

Answer

Lipids

Question 10

Which of the following is not a phospholipid ?

Accepted Answer

Ganglioside

Answer

Lecithin

Answer

Plasmalogen

Answer

Cardiolipin

NEET-PG 2013 — Biochemistry