Overview - Metabolic Mayhem Kickoff
- Inborn Errors of Metabolism (IEMs): Congenital metabolic disorders caused by single gene defects leading to enzyme deficiencies and pathway blocks.
- Inheritance: Primarily Autosomal Recessive (AR).
⭐ Most inborn errors of amino acid metabolism are autosomal recessive. A key exception is Ornithine Transcarbamylase (OTC) deficiency, which is X-linked.
- Newborn Screening (NBS): Crucial for early detection, enabling prompt treatment to prevent severe, irreversible damage and improve outcomes significantly.
Aromatic AAs - Fragrant Foul-ups
$Phenylalanine \xrightarrow{Phenylalanine\ hydroxylase, BH_4} Tyrosine$

| Disorder | Defective Enzyme | Accumulated Metabolite(s) | Key Clinical Features |
|---|---|---|---|
| Phenylketonuria (PKU) | Phenylalanine hydroxylase (PAH) | Phenylalanine, Phenylketones | Musty odor, ID, eczema, seizures. Phe > 20 mg/dL. 📌 Phenylalanine Hydroxylase Unable. |
| Alkaptonuria | Homogentisate oxidase | Homogentisic acid (HGA) | Dark urine, ochronosis, arthritis. |
| Tyrosinemia Type I | Fumarylacetoacetate hydrolase (FAH) | Fumarylacetoacetate, Succinylacetone | Cabbage odor, liver failure (↑HCC), RTA, rickets. |
| Tyrosinemia Type II | Tyrosine aminotransferase (TAT) | Tyrosine | Palmar/plantar hyperkeratosis, corneal lesions, ID. |
| Tyrosinemia Type III | 4-Hydroxyphenylpyruvate dioxygenase | 4-Hydroxyphenylpyruvate, Tyrosine | Rare; ataxia, seizures, mild ID. |
BCAA Disorders - Sweet Urine Woes
- Maple Syrup Urine Disease (MSUD)
- Enzyme defect: Branched-chain α-ketoacid dehydrogenase (BCKDH) complex.
- Accumulates: BCAAs (Leucine, Isoleucine, Valine) & their α-ketoacids.
- 📌 Mnemonic: I Love Vermont (maple syrup) for Isoleucine, Leucine, Valine.
- Features: Maple syrup/burnt sugar odor (urine, cerumen), neurotoxicity (lethargy, irritability, seizures, coma), poor feeding.

-
⭐ Leucine is considered the most neurotoxic of the branched-chain amino acids in MSUD.
Sulfur AA Slip-ups - Homocysteine Havoc
- Homocystinuria (Classical Type):
- Defective Enzyme: Cystathionine β-synthase (CBS) ↓.
- Cofactor: Pyridoxal phosphate (Vitamin B6).
- Accumulated: ↑ Homocysteine, ↑ Methionine.
- Reaction: $Homocysteine + Serine \xrightarrow{CBS, B6} Cystathionine$.
- Key Clinical Features: Marfanoid habitus, ectopia lentis (downward & inward), intellectual disability, thromboembolism, osteoporosis. Note B6 responsiveness.
- 📌 Mnemonic HOMOCY: Homocysteine ↑, Osteoporosis/ Ocular (↓ lens), Marfanoid habitus, Cardiovascular (thromboembolism), kYphosis/ Intellectual disability.

⭐ Unlike Marfan syndrome, lens dislocation in homocystinuria is typically downward and inward (inferonasal).
Urea Cycle - Ammonia Alert!
- Function: Detoxifies ammonia ($NH_3$) from amino acid catabolism into urea for renal excretion.
- Hyperammonemia S/S: Vomiting, lethargy, seizures, coma, cerebral edema. Initial respiratory alkalosis.
- Ornithine Transcarbamylase (OTC) Deficiency: X-linked recessive. ↑ urinary orotic acid.
⭐ OTC deficiency is the most common urea cycle disorder; X-linked, presents with hyperammonemia & ↑ urinary orotic acid. 📌 Urea Cycle: Orange Colored Cats Always Ask For Awesome Umbrellas.

Transport Defects - AA Airlift Issues
| Disorder | Defective Transporter | Affected AAs | Key Clinical Features |
|---|---|---|---|
| Cystinuria | Dibasic AA (kidney/intestine) | 📌 COLA (Cystine, Ornithine, Lysine, Arginine) | Recurrent cystine stones (hexagonal crystals) |
| Hartnup Dx | Neutral AA (kidney/intestine) | Neutral (e.g., Tryptophan) | Pellagra-like (3Ds: dermatitis, diarrhea, dementia/ataxia); ↓ niacin |
High‑Yield Points - ⚡ Biggest Takeaways
- PKU: Phenylalanine hydroxylase deficiency; mousy/musty odor, intellectual disability, eczema, fair skin.
- Alkaptonuria: Homogentisate oxidase deficiency; black urine on standing, ochronosis (cartilage, sclera), arthritis.
- MSUD: BCKDC deficiency (branched-chain); maple syrup urine odor, neurotoxicity, poor feeding.
- Homocystinuria (CBS def.): Downward ectopia lentis, thromboembolism, osteoporosis, marfanoid habitus.
- Tyrosinemia Type I: Fumarylacetoacetate hydrolase deficiency; cabbage-like odor, severe liver failure, ↑ AFP.
- Cystinuria: Defective renal COLA transporter (Cystine, Ornithine, Lysine, Arginine); recurrent hexagonal cystine stones.
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