Spectrophotometry and Colorimetry

Spectrophotometry and Colorimetry

Spectrophotometry and Colorimetry

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Light's Dance - Absorbance Rules

  • Spectrophotometry & Colorimetry: Techniques measuring substance concentration based on light absorption/transmission.
    • Spectrophotometry: Uses specific wavelengths.
    • Colorimetry: Uses visible light; often for colored solutions.
  • Principle: Interaction of light with matter. Light absorbed by a solution is proportional to the concentration of the absorbing substance.
  • Beer-Lambert Law: $A = \epsilon c l$
    • $A$: Absorbance (no units)
    • $\epsilon$: Molar absorptivity (L·mol⁻¹·cm⁻¹)
    • $c$: Concentration (mol/L)
    • $l$: Path length (cm)
  • Absorbance & Transmittance: $A = -\log T$ or $A = \log(1/T)$, where $T$ is transmittance.
  • Limitations: Deviations at high concentrations, chemical reactions, stray light, non-monochromatic light.

Beer-Lambert Law Diagram

⭐ Beer-Lambert Law is the cornerstone of quantitative analysis using spectrophotometry, directly relating absorbance to concentration.

The Machine - Peeking Inside

  • Spectrophotometer Components:
    • Light Source: UV (Deuterium lamp), Visible (Tungsten lamp).
    • Monochromator: Prism or Grating; selects specific wavelength ($\lambda$).
    • Sample Holder: Cuvette (path length usually 1 cm).
    • Detector: Photomultiplier Tube (PMT) or Photodiode; measures transmitted light intensity.
    • Readout Device: Displays absorbance/transmittance.
  • Colorimeter Components:
    • Light Source: LED or Tungsten lamp.
    • Filter: Selects a specific range of wavelengths.
    • Sample Holder: Cuvette.
    • Detector: Photocell or Photodiode.
    • Readout Device.
  • Cuvette Types:
    • Quartz: For UV light (<340 nm).
    • Glass/Plastic: For visible light.
    • 📌 Mnemonic: "Quite Useful Glass Visible" (Quartz-UV, Glass-Visible).
  • Key Difference: Spectrophotometer uses a monochromator (precise $\lambda$); Colorimeter uses a filter (broader $\lambda$ range).

Spectrophotometer schematic diagram

⭐ Quartz cuvettes are essential for UV spectrophotometry as glass absorbs UV light significantly, especially <340 nm.

Lab Detective - Finding Clues

  • Quantitative Analysis (Concentration):
    • Proteins: Biuret, Lowry methods.
    • Nucleic Acids: Absorbance at $A_{260}$.
    • Metabolites: Glucose (GOD-POD), cholesterol.
    • Hemoglobin: Cyanmethemoglobin method ($A_{540}$).
  • Qualitative Analysis (Identification):
    • Absorption spectra identify substances by unique peak absorbance wavelengths. DNA purity ratios with contaminants
  • Enzyme Kinetics:
    • Measure reaction rates by monitoring changes in absorbance of substrate/product over time.
  • Purity Assessment (Nucleic Acids):
    • $A_{260}/A_{280}$ ratio:
      • Pure DNA ≈ 1.8.
      • Pure RNA ≈ 2.0.
    • Ratios < 1.8 (DNA) or < 2.0 (RNA) suggest protein/phenol contamination.

⭐ The $A_{260}/A_{280}$ ratio is a widely used, quick method to assess the purity of nucleic acid preparations.

  • Clinical Examples:
    • Hemoglobin estimation: Drabkin’s (cyanmethemoglobin) method.
    • Glucose estimation: GOD-POD (Glucose Oxidase-Peroxidase) method.

Color Power - Simpler & Specific

  • Colorimetry:
    • Simpler technique; uses filters for broad wavelength bands (visible range).
    • Principle: Measures colored solution intensity.
    • Follows Beer-Lambert Law: $A = \epsilon c l$.
  • Calibration Curve:
    • Plot Absorbance vs. known concentrations of standards.
    • Essential for quantification.
  • Blanks:
    • Purpose: Zero instrument; correct for solvent/reagent absorbance.
    • Types: Reagent blank, sample blank.
FeatureSpectrophotometryColorimetry
Wavelength SelectorMonochromator (precise)Filters (broad bands)
RangeUV, Visible, IRVisible
SensitivityHigherLower
CostHigherLower
ComplexityMore complexSimpler

⭐ Colorimeters use filters to select a range of wavelengths, making them simpler and cheaper but less specific than spectrophotometers which use monochromators.

High‑Yield Points - ⚡ Biggest Takeaways

  • Beer-Lambert Law governs: Absorbance proportional to concentration & path length.
  • Spectrophotometry measures substance concentration via light absorbance/transmittance at specific wavelengths.
  • Colorimetry is a spectrophotometry type limited to the visible spectrum.
  • Cuvette choice crucial: quartz for UV, glass/plastic for visible light.
  • A blank solution is essential for accuracy, correcting background absorbance.
  • Key uses: Quantifying DNA, RNA, proteins; monitoring enzyme kinetics.
  • High concentrations can cause deviation from Beer-Lambert's linearity.

Practice Questions: Spectrophotometry and Colorimetry

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Flashcards: Spectrophotometry and Colorimetry

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_____ gives DNA a green fluoresence and RNA a red fluoresence

Hint: Fluorescent dye

TAP TO REVEAL ANSWER

_____ gives DNA a green fluoresence and RNA a red fluoresence

Acridine orange

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