Crohn's Overview - The Patchy Attacker
- A chronic, relapsing inflammatory bowel disease (IBD) defined by transmural inflammation.
- Can affect any segment of the GI tract ("gum to bum"), but most commonly involves the terminal ileum.
- Hallmark features include discontinuous inflammation (skip lesions) and a "cobblestone" mucosal appearance.
- In contrast, Ulcerative Colitis is mucosal and continuous.
📌 Mnemonic: An old Crone is skipping down a cobblestone street (Crohn's, skip lesions, cobblestone mucosa).

⭐ Non-caseating granulomas are pathognomonic but found in only about 30% of biopsies.
Pathogenesis - A Gut Reaction
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Genetic Susceptibility: Key association with NOD2/CARD15 gene mutations, which impair the ability of Paneth cells to sense and clear intracellular bacteria.
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Immune Dysregulation: An unchecked, exaggerated adaptive immune response driven by Th1 and Th17 cells.
- Leads to overproduction of pro-inflammatory cytokines, including TNF-α, IL-12, IL-23, and IFN-γ.
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Environmental Factors:
- Smoking is the strongest environmental risk factor, significantly increasing disease risk and severity.
- Likely involves gut microbiome dysbiosis.
⭐ Defective NOD2 in Paneth cells impairs their secretion of antimicrobial α-defensins, crippling the innate defense against gut microbes and initiating the inflammatory cascade.
Pathological Hallmarks - Cobblestones & Granulomas
- Gross Pathology: Characterized by segmental "skip lesions."
- Appearance: Deep, linear, serpentine ulcers create a classic cobblestone pattern.
- Bowel Wall: Thickened and rubbery due to edema, inflammation, and fibrosis.
- Mesentery: Creeping fat (mesenteric fat wrapping the serosa) is a hallmark.
- Complications: Strictures, fistulas, and abscesses.

- Microscopic Pathology:
- Inflammation: Transmural, involving all layers from mucosa to serosa.
- Granulomas: Non-caseating granulomas are pathognomonic but found in only ~30-50% of cases.
⭐ The presence of non-caseating granulomas on biopsy is highly specific for Crohn's disease, but their absence does not rule it out.
| Feature | Crohn's Disease | Ulcerative Colitis |
|---|---|---|
| Inflammation Depth | Transmural | Mucosal & Submucosal |
| Distribution | Skip Lesions | Continuous, ascending |
| Granulomas | Yes (non-caseating) | No |
| Gross Appearance | Cobblestones, creeping fat | Friable mucosa, pseudopolyps |
High‑Yield Points - ⚡ Biggest Takeaways
- Crohn's is defined by transmural inflammation, affecting the entire bowel wall, which can lead to fistulas and strictures.
- It classically presents with skip lesions-discontinuous segments of inflammation-anywhere from the mouth to the anus.
- The terminal ileum and colon are the most common sites of involvement.
- Histology reveals non-caseating granulomas and lymphoid aggregates in about 50% of cases.
- The pathophysiology is driven by a Th1 and Th17-mediated immune response against gut flora.
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