Intro & Types - Chromosome Chaos
- Abnormalities in chromosome number or structure.
- Numerical Abnormalities (Aneuploidy & Polyploidy):
- Aneuploidy: Incorrect chromosome number (not a multiple of haploid set).
- E.g., Trisomy ($2n+1$), Monosomy ($2n-1$).
- Mechanism: Nondisjunction (meiosis/mitosis).
- Polyploidy: >2 haploid sets (e.g., Triploidy $3n$).
- Aneuploidy: Incorrect chromosome number (not a multiple of haploid set).
- Structural Abnormalities: Altered chromosome structure.
- Deletions, Duplications.
- Translocations (Reciprocal, Robertsonian).
- Inversions (Paracentric, Pericentric).
- Ring Chromosomes.

⭐ Robertsonian translocations typically involve acrocentric chromosomes (13, 14, 15, 21, 22) and can lead to unbalanced gametes causing conditions like translocation Down syndrome or Patau syndrome carriers.
Autosomal Trisomies - Trisomy Tales
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Down Syndrome (Trisomy 21)
- Most common viable autosomal trisomy; risk ↑ with maternal age.
- Features: Intellectual disability, flat facies, upslanting palpebral fissures, epicanthal folds, Brushfield spots (iris), single palmar crease.
- Associated: Atrioventricular septal defect (AVSD) most common CHD, duodenal atresia, ↑ risk ALL/AML, early-onset Alzheimer's disease.
- Screening (1st trimester): ↑ Nuchal Translucency (NT), ↓ PAPP-A, ↑ free β-hCG.
-
Edwards Syndrome (Trisomy 18) 📌 Election age is 18.
- Features: Severe intellectual disability, prominent occiput, micrognathia, low-set & malformed ears, clenched fists (overlapping fingers), rocker-bottom feet.
- Associated: Congenital heart defects (VSD, PDA). Poor prognosis, often fatal within 1st year.
-
Patau Syndrome (Trisomy 13) 📌 Puberty around age 13.
- Features: Severe intellectual disability, microcephaly, holoprosencephaly (midline defects), cleft lip/palate, polydactyly (post-axial), cutis aplasia (scalp defect).
- Associated: Congenital heart defects. Very poor prognosis, often fatal within days/weeks.

⭐ The most common congenital heart defect in Down syndrome is an Atrioventricular Septal Defect (AVSD).
Sex Chromosome Aneuploidies - X & Y Files
- Klinefelter Syndrome (47,XXY)
- Male phenotype, tall stature, gynecomastia, small firm testes (hypogonadism), azoospermia, infertility.
- ↑FSH, ↑LH, ↓testosterone. Barr body (+).
- Learning difficulties common.
- 📌 Mnemonic: "Klinefelter's Kings have eXtra X, are Tall, Infertile, with Gynecomastia."
- Turner Syndrome (45,X)
- Female phenotype, short stature, webbed neck (pterygium colli), shield chest, ovarian dysgenesis (streak ovaries).
- Primary amenorrhea, infertility. Barr body (-).
- Associated: Coarctation of aorta (15-20%), bicuspid aortic valve, horseshoe kidney, lymphedema.
- 📌 Mnemonic: "Tina Turner is Short, has a Webbed neck, and No Xtra X."
- Other Aneuploidies
- 47,XYY (Jacobs Syndrome): Tall males, normal fertility, often phenotypically normal; may have acne, learning/speech delays.
- 47,XXX (Triple X Syndrome): Tall females, usually normal development/fertility; ↑risk of learning disabilities, premature ovarian failure.

⭐ Turner Syndrome is the only human monosomy compatible with postnatal life; coarctation of the aorta is a critical cardiovascular association to screen for, present in 15-20% of cases.
Structural Abnormalities - Gene Gymnastics
- Alterations in chromosome structure; can be balanced (no net change in genetic material) or unbalanced (loss/gain of genetic material).
- Key Types & Examples:
- Deletion: Loss of chromosomal segment.
- Cri-du-chat syndrome (5p-): High-pitched "cat-like" cry, microcephaly, severe intellectual disability.
- DiGeorge syndrome (22q11.2 deletion): 📌 CATCH-22 (Cardiac defects, Abnormal facies, Thymic hypoplasia, Cleft palate, Hypocalcemia/Hypoparathyroidism).
- Duplication: Segment repeated; results in partial trisomy.
- Translocation: Segment moved to another chromosome or different part of the same chromosome.
- Reciprocal: Mutual exchange between non-homologous chromosomes (e.g., Philadelphia chromosome).
- Robertsonian: Fusion of two acrocentric chromosomes (chr 13, 14, 15, 21, 22) at their centromeres; carriers phenotypically normal but risk for unbalanced gametes/offspring.
- Inversion: Segment breaks off, flips, and reattaches; Paracentric (excludes centromere), Pericentric (includes centromere).
- Isochromosome: One arm lost, other duplicated, forming a chromosome with two identical arms (e.g., i(Xq) in some Turner syndrome cases).
- Ring Chromosome: Ends of a chromosome break and fuse, forming a ring; often unstable.
- Deletion: Loss of chromosomal segment.
⭐ The Philadelphia chromosome, t(9;22)(q34.1;q11.2), results in the BCR-ABL1 fusion protein and is pathognomonic for Chronic Myeloid Leukemia (CML).

High‑Yield Points - ⚡ Biggest Takeaways
- Down syndrome (Trisomy 21): Most common; intellectual disability, endocardial cushion defects, ↑ risk of Alzheimer's/leukemia.
- Edwards syndrome (Trisomy 18): Rocker-bottom feet, clenched hands, severe ID, poor prognosis.
- Patau syndrome (Trisomy 13): Cleft lip/palate, polydactyly, holoprosencephaly, severe ID.
- Klinefelter syndrome (47,XXY): Male hypogonadism, tall stature, gynecomastia, Barr body present.
- Turner syndrome (45,X): Female hypogonadism, short stature, webbed neck, coarctation of aorta.
- Cri-du-chat (5p deletion): Distinctive cat-like cry, microcephaly, ID.
- DiGeorge syndrome (22q11.2 deletion): CATCH-22 mnemonic; thymic/parathyroid hypoplasia.
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