Virus Structure and Classification

Virus Structure and Classification

Virus Structure and Classification

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Viral Basics - Tiny Terrors Unveiled

  • Definition: Acellular, obligate intracellular parasites; hijack host machinery for replication.
  • Size: Range 20 nm (Parvovirus) to 300 nm (Poxvirus).
  • Core Components:
    • Nucleic Acid (Genome):
      • DNA or RNA (never both).
      • ss/ds; linear/circular/segmented.
      • Haploid (most); Retroviruses are diploid (two +ssRNA copies).
    • Capsid: Protein shell (capsomeres).
      • Functions: Protects genome, aids entry, antigenicity.
    • Envelope (if present): Host-derived lipid bilayer with viral glycoproteins (spikes).
      • Spikes: Attachment, fusion, major antigens.
  • Key Viral Enzymes (virally coded, not all possess):
    • e.g., RNA-dependent RNA polymerase (RdRp), Reverse Transcriptase (RT), Integrase, Protease.

Enveloped vs. Nonenveloped Virus Structure Comparison virus structures, highlighting nucleic acid, capsid, envelope, and glycoprotein spikes)

⭐ Retroviruses (e.g., HIV) are diploid (+ssRNA) and carry reverse transcriptase for DNA synthesis from RNA.

Viral Architecture - Shape Shifters

Viruses exhibit diverse capsid symmetries, crucial for their structure and function. The capsid protects the viral genome.

  • Three main types of symmetry:
    • Icosahedral
    • Helical
    • Complex

Virus Symmetry: Helical, Icosahedral, and Complex

SymmetryDescriptionExamples
IcosahedralPolyhedron with 20 equilateral triangular faces & 12 vertices. Efficient packaging.Adenovirus, Herpesvirus, Picornavirus (📌 AHP-I)
HelicalCapsomeres arranged in a hollow, spiral tube around the nucleic acid.Influenza, Rabies, Paramyxoviruses, TMV
ComplexNeither purely icosahedral nor helical; may possess additional structures.Poxviruses (brick-shaped), Bacteriophages (head-tail structure)

Viral Taxonomy - Naming Nightmares

  • ICTV Classification: Hierarchical system: Order (-virales), Family (-viridae), Subfamily (-virinae), Genus (-virus), Species. Note: Family names always end in -viridae.
  • Baltimore Classification: 7 groups based on mRNA synthesis pathway:
    • Group I: dsDNA (e.g., Herpesvirus)
    • Group II: ssDNA (e.g., Parvovirus)
    • Group III: dsRNA (e.g., Reovirus)
    • Group IV: +ssRNA (e.g., Poliovirus)
    • Group V: -ssRNA (e.g., Influenza virus)
    • Group VI: ssRNA-RT (e.g., HIV)
    • Group VII: dsDNA-RT (e.g., Hepatitis B virus) 📌 Mnemonic: Dapper Students Devour Positive News, Reading Diligently (dsDNA, ssDNA, dsRNA, +ssRNA, -ssRNA, RNA-RT, DNA-RT).

Baltimore Classification and mRNA Synthesis

  • Other Criteria for Classification: Nucleic acid type (DNA/RNA), strandedness (single/double), envelope (presence/absence), capsid symmetry (e.g., icosahedral, helical), host range.

⭐ Poxviruses (dsDNA) are unique: DNA viruses that replicate entirely in the cytoplasm of the host cell.

Oddballs Out - Rogue Agents

Atypical infectious agents, distinct from viruses, lacking some core viral components.

  • Prions (Proteinaceous Infectious Particles)

    • No nucleic acid; solely abnormal PrPSc protein.
    • Mechanism: Converts normal PrPc to pathogenic PrPSc.
    • Diseases: CJD, Kuru, BSE (mad cow), Scrapie.
    • Highly resistant to standard sterilization.

      ⭐ Prions resist standard autoclaving (121°C, 15 min). Require 134°C for 18+ min or specific chemical treatments (e.g., NaOH, NaOCl).

  • Viroids

    • Smallest infectious agents: circular ssRNA.
    • No protein coat (capsid).
    • Primarily plant pathogens (e.g., Potato Spindle Tuber Viroid - PSTVd).
  • Virusoids (Satellites)

    • Small ssRNA entities; depend on a helper virus for replication & encapsidation.
    • Example: Hepatitis D Virus (HDV) requires Hepatitis B Virus (HBV).

Table: Comparison of Rogue Agents

FeaturePrionsViroidsVirusoids (Satellites)Viruses (Typical)
Nucleic AcidNonessRNA (circular)ssRNADNA or RNA (ss or ds)
ProteinYes (PrPSc - abnormal)NoNo (capsid from helper)Yes (Capsid, enzymes)
Helper VirusNoNoYes (Essential)No
HostAnimals, HumansPlantsPlants, Animals (e.g., HDV)All life forms
Key DiseasesCJD, Kuru, BSEPSTVdHepatitis D (with HBV)Influenza, HIV, Measles

High‑Yield Points - ⚡ Biggest Takeaways

  • Viruses: obligate intracellular parasites with DNA or RNA genomes.
  • Structure: Nucleic acid + capsid (protein coat) = nucleocapsid; some have lipid envelope.
  • Capsid symmetry: Icosahedral, helical, or complex.
  • Baltimore classification: Based on mRNA synthesis pathway; 7 groups.
  • Naked viruses are generally more resistant to disinfectants than enveloped viruses.
  • All DNA viruses are dsDNA except Parvoviridae (ssDNA).
  • Most RNA viruses are ssRNA; Reoviridae (e.g., Rotavirus) is dsRNA.

Practice Questions: Virus Structure and Classification

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The paramyxovirus that lacks both hemagglutinin and neuraminidase activities is:

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Flashcards: Virus Structure and Classification

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The double walled complete Hep. B virus is also called _____

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The double walled complete Hep. B virus is also called _____

Dane particle

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