Regulation of Gene Expression

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Basics of Gene Regulation - Control Central

  • Gene Regulation: Microbes precisely control gene expression to adapt to environmental changes, conserve energy, and ensure cellular functions. Essential for survival and virulence.
  • Levels of Control:
    • Transcriptional: Most common; controls RNA synthesis.
    • Translational: Controls protein synthesis from mRNA.
    • Post-translational: Modifies protein activity after synthesis.
  • Gene Types:
    • Constitutive (Housekeeping): Always expressed; essential functions.
    • Inducible/Repressible: Expression turned ON/OFF as needed.
  • Key Elements:
    • DNA Sequences: Promoters (initiate transcription), Operators (repressor binding site), Enhancers (activator binding site).
    • Regulatory Proteins: Activators (↑ transcription), Repressors (↓ transcription).

⭐ Transcriptional control is the most energy-efficient and therefore the most common mode of gene regulation in prokaryotes.

The Operon Model - Switch On/Off

  • Operon: Functional DNA unit: promoter, operator, structural genes.
  • Lac Operon (Inducible - lactose catabolism)
    • Genes: lacZ (β-galactosidase), lacY (permease), lacA (transacetylase).
    • Negative Control: Repressor (LacI) binds operator (lactose absent). Inducer: Allolactose.
    • Positive Control: ↓Glucose → ↑cAMP → CAP-cAMP complex binds promoter → ↑transcription.
    • 📌 Mnemonic: LAG: Lac Absent, Gluc present=OFF; LAP: Lac Absent, Gluc Absent=OFF (CAP ready); LPG: Lac Present, Gluc present=Low expr; LPA: Lac Present, Gluc Absent=ON.

    ⭐ Allolactose, an isomer of lactose, is the actual inducer for the lac operon, not lactose itself.

  • Trp Operon (Repressible - tryptophan synthesis)
    • Genes: trpE, D, C, B, A.
    • Negative Control: Repressor inactive. Corepressor: Tryptophan. High Trp → Repressor active → Operon OFF.
    • Attenuation: Fine-tuning via leader sequence (trpL).
      • Low Trp: Ribosome stalls → anti-termination loop → transcription ON.
      • High Trp: Ribosome proceeds → termination loop → transcription OFF.
![Trp Operon Attenuation Mechanism](https://ylbwdadhbcjolwylidja.supabase.co/storage/v1/object/public/notes/L1/Microbiology_Microbial_Genetics_Regulation_of_Gene_Expression/2b82d0b9-b573-4584-9ff5-2959ff9722b8.svg)

Broader Regulatory Networks - Smart Systems

  • Catabolite Repression (Glucose Effect): Global regulation prioritizing glucose.
    • Low Glucose: ↑ cAMP → cAMP binds Catabolite Activator Protein (CAP/CRP) → CAP-cAMP complex activates operons for alternative sugars (e.g., lac).
    • High Glucose: ↓ cAMP → CAP inactive → repression of these operons.
  • Two-Component Regulatory Systems (TCS): Key for signal transduction.
    • Sensor Kinase (SK): Transmembrane histidine kinase; detects external signal, autophosphorylates.
    • Response Regulator (RR): Cytoplasmic; receives phosphate from SK, typically altering gene expression. Bacterial Two-Component Regulatory System
  • Quorum Sensing (QS): Cell-density dependent gene regulation.
    • Bacteria produce & release autoinducers (AIs).
    • High cell density → ↑ AIs → threshold reached → coordinated gene expression.
    • Autoinducers:
      • Gram-negative: Acyl-Homoserine Lactones (AHLs).
      • Gram-positive: Autoinducing Peptides (AIPs).
    • Roles: Biofilm formation, virulence factor expression. Bacterial Quorum Sensing Overview

    ⭐ Many pathogenic bacteria utilize quorum sensing to coordinate the expression of virulence factors, only launching an attack when sufficient numbers are present.

High‑Yield Points - ⚡ Biggest Takeaways

  • Operons (e.g., lac, trp) are fundamental for prokaryotic gene regulation.
  • Lac operon: Inducible by lactose; CAP-cAMP mediates positive control (catabolite repression), repressor mediates negative control.
  • Trp operon: Repressible by tryptophan; also features attenuation for fine-tuning.
  • Sigma factors direct RNA polymerase to specific promoters for transcription initiation.
  • Two-component regulatory systems allow bacteria to sense and adapt to environmental stimuli.
  • Quorum sensing enables cell density-dependent gene expression and group behaviors.

Practice Questions: Regulation of Gene Expression

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Which of the following bacteria produces a toxin that inhibits protein synthesis?

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Flashcards: Regulation of Gene Expression

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Which 5 bacterial toxins depend on lysogeny in order to be secreted by their corresponding bacteria?_____Botulinum ToxinCholera ToxinDiphtheria ToxinShiga Toxin

TAP TO REVEAL ANSWER

Which 5 bacterial toxins depend on lysogeny in order to be secreted by their corresponding bacteria?_____Botulinum ToxinCholera ToxinDiphtheria ToxinShiga Toxin

Group A strep Erythrogenic toxin (causes scarlet fever)

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