Bacterial Genetics

On this page

Bacterial Genome Structure - DNA & Plasmids Galore

  • Bacterial Chromosome (Nucleoid):
    • Primary genetic material; typically single, circular, double-stranded DNA (dsDNA).
    • Located in cytoplasm (nucleoid region); no nuclear membrane.
    • Haploid: one copy of each gene.
    • Highly supercoiled (by DNA gyrase/topoisomerases).
    • Associated with histone-like proteins (not true histones).
  • Plasmids:
    • Extrachromosomal, small, circular, dsDNA molecules.
    • Replicate autonomously (own origin of replication - ori).
    • Carry non-essential genes:
      • Antibiotic resistance (R-plasmids).
      • Fertility factors (F-plasmids).
      • Toxins, virulence factors.
    • Variable size and copy number per cell.

⭐ Plasmids are key tools in recombinant DNA technology and major contributors to the spread of antibiotic resistance. Bacterial Cell Structure and Genetics

Bacterial Gene Transfer - Gene Swap Shop

📌 Mnemonic: Take (Transformation), Through (Transduction), Connect (Conjugation)

  • Transformation: Uptake of naked DNA (plasmids, fragments) from environment by "competent" cells.
    • Examples: S. pneumoniae (Griffith's), H. influenzae, Neisseria.
    • Artificial: Electroporation, $CaCl_2$ heat shock.
  • Transduction: Bacteriophage transfers bacterial DNA.
    • Generalized: Random bacterial DNA packaged into phage (lytic cycle). Any gene.
    • Specialized: Specific genes near prophage site transferred via faulty excision (lysogenic cycle).
  • Conjugation: Direct DNA transfer (plasmids, chromosomal DNA) via sex pilus; cell-to-cell contact.
    • F-plasmid ($F$ factor): $F^+$ (donor) transfers plasmid to $F^-$ (recipient); recipient becomes $F^+$.
    • Hfr: Integrated F-plasmid allows transfer of chromosomal genes.

Bacterial Transformation, Transduction, and Conjugation

⭐ Conjugation, via R-plasmids, is a primary mechanism for spreading multidrug resistance (MDR) among bacteria.

Bacterial Mutation & Repair - Code Changes & Fixes

  • Mutations: Heritable DNA sequence alterations.
    • Point Mutations: Single base changes.
      • Silent: No amino acid change.
      • Missense: Different amino acid.
      • Nonsense: STOP codon created.
    • Frameshift Mutations: Insertions/deletions (not multiples of 3 bp), alters reading frame.
  • Mutagens: Agents increasing mutation rate.
    • Physical: UV light (forms pyrimidine dimers, e.g., $T=T$), Ionizing radiation (causes dsDNA breaks).
    • Chemical: Base analogs (e.g., 5-bromouracil), Alkylating agents, Intercalating agents (e.g., ethidium bromide).
  • Repair Mechanisms:
    • Direct Repair: E.g., Photolyase (light-dependent, repairs $T=T$ dimers).
    • Excision Repair:
      • Base Excision Repair (BER): Removes specific damaged bases.
      • Nucleotide Excision Repair (NER): UvrABC endonuclease removes bulky lesions (e.g., $T=T$ dimers).
    • Mismatch Repair (MMR): MutS, MutL, MutH; corrects errors post-replication.
    • Recombinational Repair: RecA-mediated; repairs dsDNA breaks or gaps.
    • SOS Response: Inducible, error-prone repair system (RecA, LexA); activated by extensive DNA damage. 📌 Last resort defense. DNA damage types and repair mechanisms diagram

⭐ The Ames test uses Salmonella typhimurium auxotrophs (histidine-dependent) to screen for chemical mutagenicity by observing reversion to prototrophy.

Bacterial Gene Regulation - Operon Operations

  • Operon: Cluster of genes transcribed together from one promoter; allows coordinated gene expression.
    • Components: Promoter (P), Operator (O), Structural genes.
    • Regulator gene: Codes for repressor/activator protein; may be distant.
  • Lac Operon (Inducible System): Catabolizes lactose.
    • Default: OFF (Repressor bound to Operator).
    • Inducer (Allolactose): Binds repressor → conformational change → repressor detaches → transcription ON.
    • Positive regulation: Catabolite Activating Protein (CAP) + cAMP enhance transcription when glucose is low.
  • Trp Operon (Repressible System): Synthesizes tryptophan.
    • Default: ON (Repressor inactive).
    • Corepressor (Tryptophan): Binds repressor → activates it → repressor binds operator → transcription OFF.
    • Attenuation: Fine-tunes transcription based on Trp availability.

Trp operon regulation

⭐ The Lac operon is an example of an inducible operon, meaning its genes are expressed only when an inducer (lactose/allolactose) is present. This prevents wasteful synthesis of enzymes when the substrate is unavailable. 📌 Inducible = Inactivated repressor by Inducer (Lac operon).

High‑Yield Points - ⚡ Biggest Takeaways

  • Transformation: Uptake of naked DNA from environment; classic example S. pneumoniae.
  • Transduction: Bacteriophage-mediated DNA transfer; generalized (any gene) or specialized (specific genes).
  • Conjugation: Direct DNA transfer via sex pilus; requires cell contact (F-plasmid, Hfr strains).
  • Plasmids: Extrachromosomal DNA carrying antibiotic resistance (R-factors) or virulence genes.
  • Transposons: "Jumping genes" causing insertional mutagenesis and spreading drug resistance.
  • Operons (Lac, Trp): Key for coordinated bacterial gene expression and regulation.

Practice Questions: Bacterial Genetics

Test your understanding with these related questions

The initial origin of new drug resistance genes in bacteria most commonly occurs due to:

1 of 5

Flashcards: Bacterial Genetics

1/9

_____ staining procedures can be used to visualise cell walls

TAP TO REVEAL ANSWER

_____ staining procedures can be used to visualise cell walls

Differential (Simple/Differential)

browseSpaceflip

Enjoying this lesson?

Get full access to all lessons, practice questions, and more.

Start Your Free Trial