Cancer Genetics

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Cancer Genetics - Gene Game Gone Wrong

  • Oncogenes: Proto-oncogenes with gain-of-function mutations (e.g., RAS, MYC, EGFR). Drive cell proliferation.
  • Tumor Suppressor Genes (TSGs): Loss-of-function mutations (e.g., TP53, RB1, APC). Knudson's two-hit hypothesis.
  • DNA Repair Genes: Mutations lead to genomic instability (e.g., BRCA1/2, MSH/MLH in Lynch syndrome).
  • Epigenetic Changes: Alter gene expression without DNA sequence change (e.g., methylation, acetylation).
  • Hereditary Cancer Syndromes: Often autosomal dominant inheritance (e.g., Li-Fraumeni, Lynch, FAP). DNA methylation in normal and tumor cells

TP53 (guardian of the genome) is the most frequently mutated gene across all human cancers, involved in >50% of cases.

Hereditary Syndromes - Cancer Families

SyndromeGene(s)CancersInheritance
LynchMSH2, MLH1+CRC, Endometrial, Ovarian, StomachAD
FAPAPCCRC (100%), Duodenal, ThyroidAD
Li-FraumeniTP53Sarcoma, Breast, Brain, Leukemia, AdrenalAD
HBOCBRCA1/2Breast, Ovarian, Prostate, PancreaticAD
VHLVHLHemangioblastoma, RCC (clear), PheoAD
MEN1MEN1Parathyroid, Pancreatic NET, Pituitary (3P's)AD
MEN2RETMTC, Pheo; Parathyroid (2A)/Neuromas (2B)AD
RetinoblastomaRB1Retinoblastoma, OsteosarcomaAD

⭐ Knudson's "two-hit" hypothesis is key for RB1 (Retinoblastoma) & other tumor suppressor genes.

Oncogenes & TSGs - Accelerators & Brakes

Oncogenes act as "accelerators" for cell growth, requiring one activating mutation. Tumor Suppressor Genes (TSGs) act as "brakes", typically needing two inactivating mutations (hits) to lose function.

FeatureOncogenes (OG)Tumor Suppressor Genes (TSG)
Analogy🚗 Accelerator🛑 Brake
FunctionPromote cell growth/divisionInhibit cell growth/division, repair DNA
MutationGain-of-function (GoF)Loss-of-function (LoF)
Alleles1 hit (dominant)2 hits (recessive, Knudson's)
ExamplesRAS, MYC, HER2, ABL, BRAFTP53, RB1, BRCA1/2, APC, PTEN

⭐ "Guardian of the Genome": TP53 is a critical TSG; its mutation is found in >50% of human cancers.

Simplified p53 Activation & Role (TSG Example):

Knudson's two-hit hypothesis for TSG inactivation

DNA Repair - Cellular Fix-it Fails

Defective DNA repair leads to genomic instability, a hallmark of cancer. Key pathways:

PathwayKey Gene(s)Associated Disorder(s)
Mismatch Repair (MMR)MSH2, MLH1, PMS2Lynch Syndrome (HNPCC)
Nucleotide Excision Repair (NER)XPA-XPGXeroderma Pigmentosum (XP)
Base Excision Repair (BER)MUTYHMUTYH-associated polyposis
Homologous Recombination (HR)BRCA1, BRCA2, ATM, PALB2Hereditary Breast/Ovarian Cancer, Ataxia-Telangiectasia (AT)
Non-Homologous End Joining (NHEJ)XRCC4, LIG4LIG4 syndrome

⭐ Xeroderma Pigmentosum (XP) results from NER defects, leading to extreme UV sensitivity and skin cancer development at a young age.

Clinical Cancer Genetics - Precision Strikes

  • Genetic Testing: Identifies germline (inherited, e.g., BRCA) & somatic (tumor-specific, e.g., EGFR) mutations.
  • Precision Oncology: Guides targeted therapies (e.g., imatinib, olaparib) & immunotherapy selection.
  • Prognosis & Risk: Assesses tumor behavior, recurrence risk, and hereditary cancer predisposition for family screening.

Cancer genetic testing decision tree

⭐ Liquid biopsies analyzing circulating tumor DNA (ctDNA) offer minimally invasive tumor genotyping and monitoring of treatment response.

High‑Yield Points - ⚡ Biggest Takeaways

  • Knudson's two-hit hypothesis applies to tumor suppressor genes (e.g., RB1, TP53).
  • Proto-oncogenes (e.g., RAS, MYC) require one activating mutation.
  • Germline TP53 mutations cause Li-Fraumeni syndrome, predisposing to multiple cancers.
  • BRCA1/BRCA2 mutations confer high risk for hereditary breast and ovarian cancer.
  • Lynch syndrome (HNPCC) involves DNA mismatch repair gene defects (e.g., MSH2, MLH1).
  • Philadelphia chromosome t(9;22) (BCR-ABL) is key in CML.
  • Loss of heterozygosity (LOH) often inactivates the second allele of tumor suppressor genes.

Practice Questions: Cancer Genetics

Test your understanding with these related questions

Which type of thyroid cancer is associated with primary hyperparathyroidism and phaeochromocytoma?

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Flashcards: Cancer Genetics

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What is the inheritence pattern of Brunner's syndrome?_____

TAP TO REVEAL ANSWER

What is the inheritence pattern of Brunner's syndrome?_____

X-linked recessive

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