HCV resistance and treatment failure

HCV resistance and treatment failure

HCV resistance and treatment failure

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HCV & DAAs - The Antiviral Arsenal

HCV replication, DAA targets, and resistance mutations

Direct-Acting Antivirals (DAAs) target specific HCV non-structural proteins to halt viral replication. Key classes include:

  • NS3/4A Protease Inhibitors (-previr): E.g., Glecaprevir. Block post-translational processing of the HCV polyprotein.
  • NS5A Inhibitors (-asvir): E.g., Pibrentasvir. Interfere with viral replication and assembly.
  • NS5B Polymerase Inhibitors (-buvir): E.g., Sofosbuvir. Inhibit the RNA-dependent RNA polymerase, terminating chain elongation.

📌 Previr = Protease | Asvir = NS5A | Buvir = NS5B.

⭐ Sofosbuvir, a nucleotide analog NS5B inhibitor, has a high genetic barrier to resistance, making it a cornerstone of many DAA regimens.

Mechanisms of Resistance - Viral Escape Tactics

  • Genetic Plasticity: HCV's high replication rate (≈$10^{12}$ virions/day) and error-prone RNA polymerase (NS5B) create a diverse viral "quasispecies," ripe for mutations.
  • Resistance-Associated Variants (RAVs): These are mutations in DAA target regions (NS3/4A, NS5A, NS5B) that reduce drug susceptibility.
    • Pre-existing: Naturally present at low levels before therapy begins.
    • Emergent: Selected for and become dominant under the pressure of DAA treatment, leading to virologic failure.

HCV Genome, Protein Processing, and DAA Target Sites

NS5A RAVs: Mutations in the NS5A region (e.g., Y93H) are a major cause of treatment failure for many DAA regimens. They can confer high-level resistance and persist for years after treatment cessation.

Clinically Significant RAVs - The Usual Suspects

  • NS5A Inhibitors (-asvirs): Low Barrier to Resistance

    • Most common site for clinically significant RAVs. Single amino acid changes can confer high-level resistance.
    • Key RAVs include Q30R, L31M/V, and Y93H/N.
    • These variants primarily impact the "-asvir" class (e.g., Ledipasvir, Daclatasvir).
  • NS5B Polymerase Inhibitors (-buvirs): High Barrier to Resistance

    • Sofosbuvir is robust against resistance; clinically significant RAVs are rare.
    • The key (but unfit and rare) mutation is S282T.

⭐ Pre-treatment RAV testing (especially for NS5A variants) is crucial in specific scenarios, such as prior DAA failure or when considering certain regimens like Elbasvir/Grazoprevir for HCV genotype 1a.

Managing Treatment Failure - Salvage & Strategy

  • Post-Failure Workup: Test for Resistance-Associated Variants (RAVs), especially in the NS5A gene, to guide subsequent therapy selection.
  • Salvage Principles:
    • Switch to different DAA classes not previously used.
    • Use potent, pangenotypic regimens.
    • Consider extending treatment duration (e.g., 12-16 weeks) or adding Ribavirin (RBV), especially with cirrhosis or complex RAVs.

⭐ Sofosbuvir/velpatasvir/voxilaprevir (Vosevi) is a highly effective single-tablet salvage regimen for patients who have failed prior DAA therapy, including those with NS5A RAVs.

High‑Yield Points - ⚡ Biggest Takeaways

  • HCV's high mutation rate, via its error-prone RNA polymerase (RdRp), is the primary driver of resistance.
  • Resistance-Associated Substitutions (RASs) can emerge during therapy, leading to treatment failure.
  • NS5A inhibitor resistance is common and clinically significant, sometimes requiring baseline RAS testing.
  • Mutations in NS5B polymerase and NS3/4A protease also confer resistance to their respective DAAs.
  • Treatment failure requires switching to a DAA regimen with a different mechanism of action.
  • Salvage therapy may involve combining DAAs, often with ribavirin.

Practice Questions: HCV resistance and treatment failure

Test your understanding with these related questions

A 23-year-old male with a homozygous CCR5 mutation is found to be immune to HIV infection. The patient’s CCR5 mutation interferes with the function of which viral protein?

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Flashcards: HCV resistance and treatment failure

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Why does HCV have a lack of proofreading ability and thus displays antigenic variation?_____

TAP TO REVEAL ANSWER

Why does HCV have a lack of proofreading ability and thus displays antigenic variation?_____

lack of 3'-5' exonuclease

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