Elongation and termination of translation

Elongation and termination of translation

Elongation and termination of translation

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Elongation Cycle - The Ribosome's Rhythm

  • Goal: Add amino acids to the growing polypeptide chain, guided by the mRNA template.
  • Energy: Requires GTP hydrolysis for tRNA binding and translocation.
  • Sites: 📌 Mnemonic: A for Aminoacyl-tRNA Arrival, P for Peptidyl-tRNA, E for Exit.

Ribosome elongation cycle with A, P, and E sites

Termination:

  • When a stop codon (UAA, UAG, UGA) enters the A site, Release Factors (RFs) bind.
  • The completed polypeptide is hydrolyzed from the P-site tRNA.

⭐ Macrolide antibiotics (e.g., Azithromycin) bind to the 50S ribosomal subunit and block the translocation step, inhibiting prokaryotic protein synthesis.

Elongation Factors - GTP's Grand Push

  • Elongation Cycle: A GTP-powered, three-step process that adds amino acids to the growing polypeptide chain.
  • Key Factors:

    • Prokaryotes: EF-Tu (tRNA delivery), EF-G (translocation).
    • Eukaryotes: eEF-1A (tRNA delivery), eEF-2 (translocation).
    • 📌 Mnemonic: Tu/1A brings tRNA to the A-site; G/2 helps it go.
  • Termination: Stop codons (UAA, UAG, UGA) recruit Release Factors (RFs) to the A-site, triggering hydrolysis and release of the polypeptide.

⭐ Diphtheria toxin and Pseudomonas Exotoxin A inhibit protein synthesis by inactivating eEF-2 through ADP-ribosylation.

Termination - The Final Full Stop

  • Process initiated when a stop codon (UAA, UAG, UGA) enters the ribosomal A site.
  • Eukaryotic releasing factors (eRFs) are key:
    • eRF1: Recognizes all three stop codons.
    • eRF3: A GTPase that helps eRF1 bind and promotes cleavage.
  • Binding of eRFs triggers hydrolysis of the bond linking the polypeptide to the tRNA in the P site.

U Are Away, U Are Gone, U Go Away - The three stop codons signal termination.

Ribosome with RF1 binding to P-tRNA and mRNA

Translation Inhibitors - Antibiotic Ambush

📌 Mnemonic: "Buy AT 30, CCEL at 50"

  • 30S Subunit Inhibitors:

    • Aminoglycosides (e.g., Gentamicin, Tobramycin)
      • Irreversibly bind to 30S, block initiation complex formation, cause misreading of mRNA.
    • Tetracyclines (e.g., Doxycycline)
      • Bind to 30S, prevent aminoacyl-tRNA from binding to the A-site.
  • 50S Subunit Inhibitors:

    • Chloramphenicol
      • Binds to 50S, inhibits peptidyltransferase.
    • Clindamycin & Erythromycin (Macrolides)
      • Bind to 50S, block translocation (movement of ribosome along mRNA).
    • Linezolid
      • Binds to 50S, prevents formation of the initiation complex.

⭐ Diphtheria toxin and Pseudomonas aeruginosa Exotoxin A inactivate eukaryotic Elongation Factor 2 (eEF-2) via ADP-ribosylation, halting human protein synthesis.

Antibiotic mechanisms on bacterial ribosome translation

High‑Yield Points - ⚡ Biggest Takeaways

  • Elongation requires GTP hydrolysis for aminoacyl-tRNA binding to the A site and for the translocation of the ribosome along the mRNA.
  • The large ribosomal subunit's rRNA acts as a ribozyme (peptidyltransferase) to catalyze peptide bond formation.
  • Termination occurs when a stop codon (UAA, UAG, UGA) enters the A site.
  • Release factors bind to the stop codon, promoting hydrolysis of the polypeptide from the tRNA.

Practice Questions: Elongation and termination of translation

Test your understanding with these related questions

An investigator studying protein synthesis in human stem cells isolates tRNA molecules bound to mRNA molecules. The isolated tRNA molecules have inosine in the 5' position of the anticodon; of these, some are bound to adenine, some to cytosine, and some to uracil at the 3' position of the mRNA codon. Which of the following properties of the genetic code is best illustrated by this finding?

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Flashcards: Elongation and termination of translation

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At what site of the ribosome does tRNA bind to for translation elongation? _____

TAP TO REVEAL ANSWER

At what site of the ribosome does tRNA bind to for translation elongation? _____

A site

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