Electron microscopy in histology

Electron microscopy in histology

Electron microscopy in histology

On this page

EM Fundamentals - Seeing the Unseen

  • Electron Microscopy (EM) uses an electron beam and magnetic lenses in a vacuum to achieve high resolution, far exceeding light microscopy. Essential for viewing organelles.
  • Types:
    • Transmission (TEM): 2D image of internal ultrastructure. Electrons pass through the specimen. 📌 TEM shows Thin, Two-dimensional slices.
    • Scanning (SEM): 3D surface view. Electrons scan the surface. 📌 SEM Sees the Surface.

⭐ Osmium tetroxide (OsO₄) is a heavy metal stain used in EM to fix and stain lipids, making them appear electron-dense (dark).

SEM vs TEM: Electron Beam Paths and Components

Microscope Showdown - TEM vs. SEM

📌 TEM = Transmits Through for a Two-D view. SEM = Scans Surface for a Superficial 3D view.

FeatureTransmission EM (TEM)Scanning EM (SEM)
Image2D projection (flat)3D surface rendering
ViewInternal ultrastructure (e.g., organelles)Surface topography (e.g., cell projections)
MechanismElectron beam passes Through a thin sliceElectron beam Scans over a coated surface
ResolutionHigher (sub-nanometer)Lower (nanometer)
Key UseVisualizing intracellular structures, virusesExamining cell surface features, tissues

⭐ Exam Favorite: SEM is classically used to visualize the detailed 3D topography of structures like renal podocytes, the stereocilia of the inner ear, or intestinal microvilli, which are often flattened and indistinguishable in TEM.

The Fix-Up - Specimen Prep Steps

  • Fixation: Glutaraldehyde cross-links proteins; Osmium tetroxide ($OsO_4$) fixes lipids.
  • Embedding: Epoxy resin provides stability for cutting under the electron beam.
  • Sectioning: Ultramicrotome with a diamond knife creates ultrathin sections (60-90 nm).
  • Staining: Electron-dense heavy metals (Lead citrate, Uranyl acetate) scatter electrons to create contrast.

⭐ Osmium tetroxide is key for membrane visualization. It binds to lipids, making membranes electron-dense and appear as dark lines in the final image.

Clinical Snapshots - What EM Reveals

Electron microscopy (EM) reveals ultrastructural details invisible on light microscopy, clinching diagnoses for specific diseases.

  • Kidney Biopsy:

    • Minimal Change Disease: Diffuse effacement (flattening) of podocyte foot processes.
    • Membranous Nephropathy: Subepithelial immune deposits creating a “spike and dome” pattern.
    • Alport Syndrome: Lamellated, basket-weave appearance of the glomerular basement membrane.
  • Other Tissues:

    • Kartagener Syndrome: Absence of dynein arms in cilia, causing immotility.
    • Langerhans Cell Histiocytosis: Rod-shaped Birbeck granules (“tennis rackets”) within cytoplasm.

⭐ The pathognomonic finding in Minimal Change Disease is podocyte effacement, which is only visible on EM; light microscopy appears normal.

Podocyte foot process effacement in minimal change disease

High‑Yield Points - ⚡ Biggest Takeaways

  • Electron microscopy (EM) offers superior resolution over light microscopy, visualizing cellular ultrastructure.
  • Transmission EM (TEM) provides 2D images of internal components like organelles and inclusions.
  • Scanning EM (SEM) generates 3D surface views, ideal for studying cell topography like microvilli.
  • Key for diagnosing kidney diseases by revealing podocyte effacement in the glomerulus.
  • Identifies viral particles and bacterial structures not visible with light microscopy.
  • Requires specialized tissue preparation, including glutaraldehyde fixation and heavy metal staining.

Practice Questions: Electron microscopy in histology

Test your understanding with these related questions

A scientist is studying the anatomy and function of bone growth. He is able to create a cell line of osteocytes with a mutation that prevents the osteocytes from exchanging nutrients and waste products within neighboring lamellae. This mutation most likely affected which of the following cell structures?

1 of 5

Flashcards: Electron microscopy in histology

1/10

In lymph nodes, _____ follicles are dense and dormant

TAP TO REVEAL ANSWER

In lymph nodes, _____ follicles are dense and dormant

primary

browseSpaceflip

Enjoying this lesson?

Get full access to all lessons, practice questions, and more.

Start Your Free Trial